Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G585150 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:147149913-147153930 (-) |
| Description | Similar to SPCC1223.01: E3 ubiquitin-protein ligase hel2 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_037132 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 24 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006417 | regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.642; coverage=43.058; evalue=1.56e-36; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006513 | protein monoubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.0; coverage=43.478; evalue=8.13e-37; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010629 | negative regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036205 | histone catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045947 | negative regulation of translational initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.0; coverage=43.478; evalue=8.13e-37; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061157 | mRNA destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070534 | protein K63-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070651 | nonfunctional rRNA decay | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070966 | nuclear-transcribed mRNA catabolic process, no-go decay | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072344 | rescue of stalled cytosolic ribosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990116 | ribosome-associated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990261 | pre-mRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.0; coverage=43.478; evalue=8.13e-37; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022626 | cytosolic ribosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.0; coverage=43.478; evalue=8.13e-37; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.0; coverage=43.478; evalue=8.13e-37; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43; UniProt GO evidence=ISM:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043022 | ribosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070181 | small ribosomal subunit rRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140517 | protein-RNA adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.0; coverage=43.478; evalue=8.13e-37; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0170011 | stalled ribosome sensor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | dre:407728 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.754; coverage=43.899; evalue=5.02e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:90850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.0; coverage=43.478; evalue=8.13e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:213753 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.642; coverage=43.058; evalue=1.56e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YDR266C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.359; coverage=40.252; evalue=1.79e-39 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539079 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.565; coverage=42.216; evalue=8.38e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |