Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA01G578650`
Query reference	TK1151
Location	Chr01:145509526-145512616 (-)
Description	Similar to TYDC3: Tyrosine/DOPA decarboxylase 3 (Papaver somniferum OX%3D3469)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_027660 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 11 GO annotations and 0 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g20340`	Bifunctional enzyme that catalyzes the decarboxylation of L- phenylalanine to 2-phenylethylamine, which is then oxidized to form 2- phenylacetaldehyde, a constituent of floral scent.	Role of aromatic aldehyde synthase in wounding/herbivory response and flower scent production in different Arabidopsis ecotypes.2011 · DOI: 10.1111/j.1365-313x.2011.04515.x
`At4g28680`	Converts tyrosine into tyramine, a precursor of isoquinoline alkaloids and various amides.	Gene expression and characterization of a stress-induced tyrosine decarboxylase from Arabidopsis thaliana.2009 · DOI: 10.1016/j.febslet.2009.05.017 Role of aromatic aldehyde synthase in wounding/herbivory response and flower scent production in different Arabidopsis ecotypes.2011 · DOI: 10.1111/j.1365-313x.2011.04515.x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os07g0437500`	Involved in serotonin biosynthesis.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006520	amino acid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.323; coverage=85.517; evalue=6.76e-118; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009821	alkaloid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.694; coverage=85.517; evalue=1.44e-115; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019752	carboxylic acid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.323; coverage=85.517; evalue=6.76e-118; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042444	phenylethylamine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.694; coverage=85.517; evalue=1.44e-115; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901695	tyramine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.694; coverage=85.517; evalue=1.44e-115; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1903184	L-dopa metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=61.694; coverage=85.517; evalue=1.44e-115; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.323; coverage=85.517; evalue=6.76e-118; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004837	tyrosine decarboxylase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.323; coverage=85.517; evalue=6.76e-118; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030170	pyridoxal phosphate binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.323; coverage=85.517; evalue=6.76e-118; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0036467	5-hydroxy-L-tryptophan decarboxylase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.323; coverage=85.517; evalue=6.76e-118; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0036468	L-dopa decarboxylase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.323; coverage=85.517; evalue=6.76e-118; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release