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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA01G542360
Query referenceTK1151
LocationChr01:136057221-136059612 (+)
DescriptionSimilar to RBL10: RHOMBOID-like protein 10%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_001370 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g25290 Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
Rhomboid proteins in the chloroplast envelope affect the level of allene oxide synthase in Arabidopsis thaliana.2012 · DOI: 10.1111/j.1365-313x.2012.05090.x
At2g29050 Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis. No verified direct reference in this release
At4g23070 Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis. No verified direct reference in this release
At1g52580 Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006508proteolysisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006654phosphatidic acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019374galactolipid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046473phosphatidic acid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.185; coverage=47.929; evalue=3.9e-16; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.185; coverage=47.929; evalue=3.9e-16; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.719; coverage=49.408; evalue=1.81e-23; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.185; coverage=47.929; evalue=3.9e-16; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009706chloroplast inner membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031969chloroplast membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004252serine-type endopeptidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G25290KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.489; coverage=90.828; evalue=2.1e-93UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G63120KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.185; coverage=47.929; evalue=3.9e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G38510KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.013; coverage=46.746; evalue=1.46e-17UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbsu:BSU04610KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.818; coverage=45.562; evalue=2.26e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbsu:BSU24870KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.719; coverage=49.408; evalue=1.81e-23UniProtKB/Swiss-Prot DAT 2026 current_release