基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G524040 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:131554030-131556315 (+) |
| 描述 | Similar to CYCD3-1: Cyclin-D3-1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_001585 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 11 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g34160 |
参与 G1/S转变时细胞周期的控制。 |
Cytokinin activation of Arabidopsis cell division through a D-type cyclin.1999 · DOI: 10.1126/science.283.5407.1541 Ectopic D-type cyclin expression induces not only DNA replication but also cell division in Arabidopsis trichomes.2002 · DOI: 10.1073/pnas.092657299 Altered cell cycle distribution, hyperplasia, and inhibited differentiation in Arabidopsis caused by the D-type cyclin CYCD3.2003 · DOI: 10.1105/tpc.004838
|
At5g67260 |
在存在 CDKA-1 时,在保卫母细胞(GMC)对称分裂之后促进保卫细胞(GCs)的分裂。 | 暂无已核实直接文献 |
At3g50070 |
促进卫细胞(GCs)中卫母细胞(GMC)对称分裂后的细胞分裂。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0392000 |
推测为D2-3型细胞周期蛋白。 | 暂无已核实直接文献 |
Os09g0466100 |
细胞周期蛋白D4-1。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000082 | G1/S transition of mitotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009735 | response to cytokinin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009744 | response to sucrose | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010444 | guard mother cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901371 | regulation of leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.401; 覆盖度=86.737; E 值=4.14e-90; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G50070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.996; 覆盖度=75.066; E 值=6.72e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G34160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.158; 覆盖度=73.74; E 值=4.99e-94 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G67260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.401; 覆盖度=86.737; E 值=4.14e-90 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0466100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=41.132; 覆盖度=70.292; E 值=5.78e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release |