Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G321520 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:79907825-79908871 (-) |
| Description | Similar to OsI_032456: GDP-mannose 3%2C5-epimerase 1 (Oryza sativa subsp. indica OX%3D39946) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022895 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 22 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g28840 |
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. | No verified direct reference in this release |
At3g46440 |
Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os11g0591100 |
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. | No verified direct reference in this release |
UniProt: A2Z7B3 |
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. | No verified direct reference in this release |
Os10g0417600 |
Catalyzes a reversible epimerization of GDP-D-mannose that precedes the committed step in the biosynthesis of vitamin C (L-ascorbate), resulting in the hydrolysis of the highly energetic glycosyl-pyrophosphoryl linkage. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001503 | ossification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006024 | glycosaminoglycan biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015012 | heparan sulfate proteoglycan biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019853 | L-ascorbic acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.107; coverage=99.468; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030166 | proteoglycan biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030198 | extracellular matrix organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033320 | UDP-D-xylose biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042732 | D-xylose metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050650 | chondroitin sulfate proteoglycan biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.859; coverage=100.266; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.859; coverage=100.266; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.859; coverage=100.266; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.859; coverage=100.266; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032580 | Golgi cisterna membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016854 | racemase and epimerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.107; coverage=99.468; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047918 | GDP-mannose 3,5-epimerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.107; coverage=99.468; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048040 | UDP-glucuronate decarboxylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051287 | NAD binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.107; coverage=99.468; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070403 | NAD+ binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G28840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.859; coverage=100.266; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os10g0417600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.107; coverage=99.468; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os11g0591100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=92.055; coverage=97.074; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:192315 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.108; coverage=88.298; evalue=1.89e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release |