基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G215230 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:54842025-54843477 (+) |
| 描述 | Similar to RIN4: RPM1-interacting protein 4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_004008 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 13 条 GO 注释和 2 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g25070 |
植物防御的重要调节剂,在病原体感染时的抵抗力中发挥核心作用。 |
RIN4 interacts with Pseudomonas syringae type III effector molecules and is required for RPM1-mediated resistance in Arabidopsis.2002 · DOI: 10.1016/s0092-8674(02)00661-x
|
At5g55850 |
蛋白质 NOI4。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002237 | response to molecule of bacterial origin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006468 | protein phosphorylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009624 | response to nematode | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.537; 覆盖度=30.37; E 值=7.21e-09; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034051 | negative regulation of plant-type hypersensitive response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.537; 覆盖度=30.37; E 值=7.21e-09; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019897 | extrinsic component of plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G25070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.253; 覆盖度=67.407; E 值=3.03e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G55850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.537; 覆盖度=30.37; E 值=7.21e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release |