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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA01G105040
Query referenceTK1151
LocationChr01:26658684-26660487 (-)
DescriptionSimilar to PSBS: Photosystem II 22 kDa protein%2C chloroplastic (Spinacia oleracea OX%3D3562)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_004825 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g44575 Plays an important role in non-photochemical quenching (NPQ), a process maintains the balance between dissipation and utilization of light energy to minimize generation of oxidizing molecules, thereby protecting the plant against photo-oxidative damage.
A pigment-binding protein essential for regulation of photosynthetic light harvesting.2000 · DOI: 10.1038/35000131
Genetic characterization of a flap1 null mutation in Arabidopsis npq4 and pgr5 plants suggests that the regulatory role of FLAP1 involves the control of proton homeostasis in chloroplasts.2019 · DOI: 10.1007/s11120-018-0575-z
Arabidopsis mutants lacking DLDG1 and non-photochemical quenching-related proteins reveal the regulatory role of DLDG1 in chloroplast pH homeostasis.2023 · DOI: 10.1002/1873-3468.14687

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: A2WXD9 Involved in high light-mediated energy-dependent nonphotochemical quenching (NPQ, qE) and thermal dissipation (TD) thus regulating energy conversion in photosystem II and protecting from photoinhibition. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009644response to high light intensityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.862; coverage=102.672; evalue=4.23e-116; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010027thylakoid membrane organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010196nonphotochemical quenchingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.862; coverage=102.672; evalue=4.23e-116; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015979photosynthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.091; coverage=104.962; evalue=1.15e-118; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009517PSII associated light-harvesting complex IICellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009523photosystem IICellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.091; coverage=104.962; evalue=1.15e-118; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009534chloroplast thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009535chloroplast thylakoid membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.091; coverage=104.962; evalue=1.15e-118; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009579thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016168chlorophyll bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019904protein domain specific bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=IPI:CAFAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.091; coverage=104.962; evalue=1.15e-118; UniProt GO evidence=IPI:IntActUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051219phosphoprotein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.091; coverage=104.962; evalue=1.15e-118; UniProt GO evidence=IPI:CAFAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051738xanthophyll bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G44575KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=75.836; coverage=102.672; evalue=2.24e-113UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0869800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.862; coverage=102.672; evalue=4.23e-116UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGnta:107778533KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=73.551; coverage=105.344; evalue=1.74e-109UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4324933KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.862; coverage=102.672; evalue=4.23e-116UniProtKB/Swiss-Prot DAT 2026 current_release