Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G067990 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:17404103-17406969 (+) |
| Description | Similar to At3g15720: Probable polygalacturonase At3g15720 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_005307 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 14 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g15720 |
Probable polygalacturonase At3g15720. | No verified direct reference in this release |
At2g41850 |
Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission. | |
At3g07970 |
Polygalacturonase required for cell type-specific pectin degradation to separate microspores. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0005975 | carbohydrate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.142; coverage=86.143; evalue=2.94e-85; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009830 | cell wall modification involved in abscission | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.962; coverage=84.758; evalue=6.23e-88; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009835 | fruit ripening | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.142; coverage=86.143; evalue=2.94e-85; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009901 | anther dehiscence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.962; coverage=84.758; evalue=6.23e-88; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010047 | fruit dehiscence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.962; coverage=84.758; evalue=6.23e-88; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045490 | pectin catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.836; coverage=91.686; evalue=2.81e-104; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048235 | pollen sperm cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.623; coverage=85.681; evalue=2.32e-85; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.836; coverage=91.686; evalue=2.81e-104; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.962; coverage=84.758; evalue=6.23e-88; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.962; coverage=84.758; evalue=6.23e-88; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.836; coverage=91.686; evalue=2.81e-104; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.836; coverage=91.686; evalue=2.81e-104; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.836; coverage=91.686; evalue=2.81e-104; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004650 | polygalacturonase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.836; coverage=91.686; evalue=2.81e-104; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G07970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.623; coverage=85.681; evalue=2.32e-85 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G15720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.836; coverage=91.686; evalue=2.81e-104 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G57510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.962; coverage=84.758; evalue=6.23e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release |