基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA01G055480 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr01:14369205-14372342 (+) |
| 描述 | Similar to HCF107: Protein high chlorophyll fluorescent 107 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_005405 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g17040 |
直接或间接参与叶绿体编码 mRNA 的加工。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000244 | spliceosomal tri-snRNP complex assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=27.719; 覆盖度=35.229; E 值=8.91e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000245 | spliceosomal complex assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.882; 覆盖度=25.216; E 值=2.99e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=27.719; 覆盖度=35.229; E 值=8.91e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006417 | regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009657 | plastid organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045292 | mRNA cis splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=27.719; 覆盖度=35.229; E 值=8.91e-14; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000974 | Prp19 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.882; 覆盖度=25.216; E 值=2.99e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046540 | U4/U6 x U5 tri-snRNP complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=27.719; 覆盖度=35.229; E 值=8.91e-14; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071007 | U2-type catalytic step 2 spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.882; 覆盖度=25.216; E 值=2.99e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071013 | catalytic step 2 spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=27.719; 覆盖度=35.229; E 值=8.91e-14; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071014 | post-mRNA release spliceosomal complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.882; 覆盖度=25.216; E 值=2.99e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008428 | ribonuclease inhibitor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G17040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.912; 覆盖度=72.806; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541185 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=27.719; 覆盖度=35.229; E 值=8.91e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | yli:2907810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.882; 覆盖度=25.216; E 值=2.99e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |