基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_039797 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | JAJTUU010000044.1:169455-173036 (-) |
| 描述 | Similar to PARN: Poly(A)-specific ribonuclease PARN (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_039797 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 36 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g55870 |
3'-外切核糖核酸酶，偏爱 mRNA 的聚 尾，从而有效降解聚 尾。 | |
At3g25430 |
3'-外切核糖核酸酶，偏爱 mRNA 的聚 (A) 尾，从而有效降解聚 (A) 尾。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000495 | box H/ACA sno(s)RNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006970 | response to osmotic stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007292 | female gamete generation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009451 | RNA modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009751 | response to salicylic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010587 | miRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032212 | positive regulation of telomere maintenance via telomerase | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071051 | poly(A)-dependent snoRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090669 | telomerase RNA stabilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0180035 | lncRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904872 | regulation of telomerase RNA localization to Cajal body | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905392 | plant organ morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.719; 覆盖度=93.567; E 值=2.78e-61; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990431 | priRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990432 | siRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.719; 覆盖度=93.567; E 值=2.78e-61; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000175 | 3'-5'-RNA exonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003730 | mRNA 3'-UTR binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004518 | nuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004535 | poly(A)-specific ribonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043169 | cation binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070034 | telomerase RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G55870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.591; 覆盖度=91.52; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G25430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.719; 覆盖度=93.567; E 值=2.78e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:524155 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=29.449; 覆盖度=69.006; E 值=2.45e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5073 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=29.73; 覆盖度=64.912; E 值=6.66e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100172259 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.505; 覆盖度=64.912; E 值=2.7e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |