基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_039642 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | JAJTUU010000020.1:466581-474252 (+) |
| 描述 | Similar to ABH1: Nuclear cap-binding protein subunit 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_039642 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 44 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g13540 |
帽结合复合物 的组成部分,与前体 mRNA 的 5' 帽共转录结合,并参与多种过程,例如前体 mRNA 剪接和 microRNA 介导的 RNA 介导的基因沉默。 |
An mRNA cap binding protein, ABH1, modulates early abscisic acid signal transduction in Arabidopsis.2001 · DOI: 10.1016/s0092-8674(01)00460-3 Localization, ion channel regulation, and genetic interactions during abscisic acid signaling of the nuclear mRNA cap-binding protein, ABH1.2002 · DOI: 10.1104/pp.009480 A link between RNA metabolism and silencing affecting Arabidopsis development.2008 · DOI: 10.1016/j.devcel.2008.04.005
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0347200 |
帽结合复合物 (CBC) 的组成部分,与前体 mRNA 的 5' 帽共转录结合,并参与多种过程,例如前体 mRNA 剪接和 microRNA (miRNA) 介导的 RNA 介导的基因沉默 (RNAi)。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000245 | spliceosomal complex assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000380 | alternative mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000956 | nuclear-transcribed mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002191 | cap-dependent translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006370 | 7-methylguanosine mRNA capping | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006401 | RNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006406 | mRNA export from nucleus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006408 | snRNA export from nucleus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006446 | regulation of translational initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008334 | histone mRNA metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.891; 覆盖度=100.815; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016071 | mRNA metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030307 | positive regulation of cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030422 | siRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=28.909; 覆盖度=78.929; E 值=2.91e-93; UniProt GO evidence=IEA:EnsemblMetazoa | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.891; 覆盖度=100.815; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031053 | primary miRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031124 | mRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031442 | positive regulation of mRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035194 | regulatory ncRNA-mediated post-transcriptional gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=28.909; 覆盖度=78.929; E 值=2.91e-93; UniProt GO evidence=IEA:EnsemblMetazoa | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035195 | miRNA-mediated post-transcriptional gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042789 | mRNA transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048026 | positive regulation of mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048574 | long-day photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050684 | regulation of mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901527 | abscisic acid-activated signaling pathway involved in stomatal movement | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.891; 覆盖度=100.815; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005846 | nuclear cap binding complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034518 | RNA cap binding complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000339 | RNA cap binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000340 | RNA 7-methylguanosine cap binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060090 | molecular adaptor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G13540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.69; 覆盖度=99.069; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dgr:6566283 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=28.614; 覆盖度=78.929; E 值=4.25e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dmo:Dmoj_GI15172 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=28.909; 覆盖度=78.929; E 值=2.91e-93 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0347200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.891; 覆盖度=100.815; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4686 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.985; 覆盖度=78.813; E 值=6.52e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release |