基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_039143 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr09:60701548-60711452 (+) |
| 描述 | Similar to VIL3: VIN3-like protein 3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_039143 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 21 条 GO 注释和 3 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g18880 |
通过调控基因表达参与春化作用和光周期途径。 | 暂无已核实直接文献 |
At5g57380 |
在冷处理后通过介导同源异型基因 FLC的初始转录抑制，在春化过程中发挥核心作用。 |
Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3.2004 · DOI: 10.1038/nature02195
|
At4g30200 |
可能通过调节基因表达参与春化和光周期途径。 | |
At3g24440 |
通过调节相关花抑制因子 FLOWERING LOCUS C 和 FLOWERING LOCUS M 的表达，参与春化和光周期途径。 |
A PHD finger protein involved in both the vernalization and photoperiod pathways in Arabidopsis.2006 · DOI: 10.1101/gad.1493306
|
At1g65750 |
推定的核糖核酸酶H蛋白At1g65750。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0001666 | response to hypoxia | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.189; 覆盖度=38.455; E 值=4.51e-80; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010048 | vernalization response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032922 | circadian regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045814 | negative regulation of gene expression, epigenetic | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.189; 覆盖度=38.455; E 值=4.51e-80; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048587 | regulation of short-day photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070417 | cellular response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140719 | constitutive heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005677 | chromatin silencing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.189; 覆盖度=38.455; E 值=4.51e-80; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.189; 覆盖度=38.455; E 值=4.51e-80; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031519 | PcG protein complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.189; 覆盖度=38.455; E 值=4.51e-80; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0062072 | histone H3K9me2/3 reader activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76; UniProt GO evidence=IDA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G18880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=36.609; 覆盖度=47.182; E 值=6.62e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G30200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.634; 覆盖度=42.273; E 值=3.31e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G57380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.189; 覆盖度=38.455; E 值=4.51e-80 | UniProtKB/Swiss-Prot DAT 2026 current_release |