基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_038928 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr09:53534892-53536160 (+) |
| 描述 | Similar to RPS21C: 40S ribosomal protein S21-2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_038928 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 13 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000447 | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000461 | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006412 | translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=75.0; 覆盖度=44.094; E 值=7.5e-27; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005840 | ribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=71.93; 覆盖度=44.882; E 值=3.35e-24; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022626 | cytosolic ribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=75.0; 覆盖度=44.094; E 值=7.5e-27; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022627 | cytosolic small ribosomal subunit | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=71.93; 覆盖度=44.882; E 值=3.35e-24; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003735 | structural constituent of ribosome | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G53890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=75.0; 覆盖度=44.094; E 值=7.5e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G27700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=82.143; 覆盖度=44.094; E 值=3.7e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0345200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=76.786; 覆盖度=44.094; E 值=1.15e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:542449 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=75.0; 覆盖度=44.094; E 值=6.33e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release |