基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_037519 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr09:12959083-12960260 (+) |
| 描述 | Similar to SNRNP59: U11/U12 small nuclear ribonucleoprotein 59 kDa protein (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_037519 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 12 条 GO 注释和 2 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000388 | spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.944; 覆盖度=95.516; E 值=8.66e-06; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000398 | mRNA splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.944; 覆盖度=95.516; E 值=8.66e-06; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.571; 覆盖度=100.448; E 值=8.02e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.571; 覆盖度=100.448; E 值=8.02e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051384 | response to glucocorticoid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.333; 覆盖度=100.897; E 值=3.49e-07; UniProt GO evidence=IDA:HGNC-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.944; 覆盖度=95.516; E 值=8.66e-06; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.333; 覆盖度=100.897; E 值=3.49e-07; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005689 | U12-type spliceosomal complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.571; 覆盖度=100.448; E 值=8.02e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.571; 覆盖度=100.448; E 值=8.02e-77; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034693 | U11/U12 snRNP | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.333; 覆盖度=100.897; E 值=3.49e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071016 | U12-type precatalytic spliceosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.333; 覆盖度=100.897; E 值=3.49e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0089701 | U2AF complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=25.333; 覆盖度=100.897; E 值=3.49e-07; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G46200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.571; 覆盖度=100.448; E 值=8.02e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10081 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.944; 覆盖度=95.516; E 值=8.66e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |