基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

基因 ID	`LXL04_035480`
当前查询版本	OH1004
位置	Chr08:23339750-23343025 (+)
描述	Similar to NAC031: Protein CUP-SHAPED COTYLEDON 3 (Arabidopsis thaliana OX%3D3702)
注释来源组装	GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_035480 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID	可能功能	对应论文 / DOI
`At1g76420`	转录激活剂。	The CUP-SHAPED COTYLEDON3 gene is required for boundary and shoot meristem formation in Arabidopsis.2003 · DOI: 10.1105/tpc.012203 Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation.2006 · DOI: 10.1105/tpc.106.045716
`At5g61430`	结合于参与叶绿素分解过程基因的启动子区域，如NYC1、SGR1、SGR2和PAO。	暂无已核实直接文献
`At3g15170`	STM 和 KNAT6 转录激活剂。	Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes.1999 · DOI: 10.1242/dev.126.8.1563 Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana.2000 · DOI: 10.1093/pcp/41.1.60 The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation.2001 · DOI: 10.1242/dev.128.7.1127 Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo.2002 · DOI: 10.1242/dev.129.17.3965 Developmental events and shoot apical meristem gene expression patterns during shoot development in Arabidopsis thaliana.2002 · DOI: 10.1046/j.1365-313x.2002.01479.x The CUP-SHAPED COTYLEDON genes promote adventitious shoot formation on calli.2003 · DOI: 10.1093/pcp/pcg038 Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis.2003 · DOI: 10.1046/j.1365-313x.2003.01759.x CUC1 gene activates the expression of SAM-related genes to induce adventitious shoot formation.2003 · DOI: 10.1046/j.1365-313x.2003.01911.x MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs.2004 · DOI: 10.1016/j.cub.2004.06.022 MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems.2004 · DOI: 10.1242/dev.01320 The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.2005 · DOI: 10.1016/j.cub.2005.02.017 KNAT6: an Arabidopsis homeobox gene involved in meristem activity and organ separation.2006 · DOI: 10.1105/tpc.106.041988 Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation.2006 · DOI: 10.1105/tpc.106.045716 Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness.2007 · DOI: 10.1242/dev.02817 Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.1997 · DOI: 10.1105/tpc.9.6.841
`At5g07680`	含NAC结构域的蛋白79。	暂无已核实直接文献
`At5g53950`	STM 和 KNAT6 转录激活剂。	Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes.1999 · DOI: 10.1242/dev.126.8.1563 Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana.2000 · DOI: 10.1093/pcp/41.1.60 Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo.2002 · DOI: 10.1242/dev.129.17.3965 The CUP-SHAPED COTYLEDON genes promote adventitious shoot formation on calli.2003 · DOI: 10.1093/pcp/pcg038 MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs.2004 · DOI: 10.1016/j.cub.2004.06.022 MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems.2004 · DOI: 10.1242/dev.01320 The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.2005 · DOI: 10.1016/j.cub.2005.02.017 KNAT6: an Arabidopsis homeobox gene involved in meristem activity and organ separation.2006 · DOI: 10.1105/tpc.106.041988 The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis.2006 · DOI: 10.1105/tpc.106.045617 Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation.2006 · DOI: 10.1105/tpc.106.045716 Plants expressing a miR164-resistant CUC2 gene reveal the importance of post-meristematic maintenance of phyllotaxy in Arabidopsis.2007 · DOI: 10.1242/dev.02774 Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness.2007 · DOI: 10.1242/dev.02817 Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.1997 · DOI: 10.1105/tpc.9.6.841

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型	ID	名称	命名空间	证据	来源
GO	GO:0006351	DNA-templated transcription	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.846; 覆盖度=75.263; E 值=1.01e-97; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009908	flower development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=68.452; 覆盖度=44.211; E 值=5.22e-76; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010014	meristem initiation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.846; 覆盖度=75.263; E 值=1.01e-97; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010072	primary shoot apical meristem specification	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=68.452; 覆盖度=44.211; E 值=5.22e-76; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010199	organ boundary specification between lateral organs and the meristem	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.846; 覆盖度=75.263; E 值=1.01e-97; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010223	secondary shoot formation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=68.452; 覆盖度=44.211; E 值=5.22e-76; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048366	leaf development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=73.377; 覆盖度=40.526; E 值=5.71e-74; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048527	lateral root development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=68.452; 覆盖度=44.211; E 值=5.22e-76; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051782	negative regulation of cell division	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=68.452; 覆盖度=44.211; E 值=5.22e-76; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090691	formation of plant organ boundary	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=68.452; 覆盖度=44.211; E 值=5.22e-76; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090709	regulation of timing of plant organ formation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=73.377; 覆盖度=40.526; E 值=5.71e-74; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990641	response to iron ion starvation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=61.026; 覆盖度=51.316; E 值=1.01e-76; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.846; 覆盖度=75.263; E 值=1.01e-97; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.846; 覆盖度=75.263; E 值=1.01e-97; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.846; 覆盖度=75.263; E 值=1.01e-97; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G76420	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=53.846; 覆盖度=75.263; E 值=1.01e-97	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G15170	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=68.452; 覆盖度=44.211; E 值=5.22e-76	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G07680	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=63.687; 覆盖度=47.105; E 值=9.09e-75	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G53950	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=73.377; 覆盖度=40.526; E 值=5.71e-74	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G61430	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=61.026; 覆盖度=51.316; E 值=1.01e-76	UniProtKB/Swiss-Prot DAT 2026 current_release