基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_034820 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr08:3339679-3344212 (-) |
| 描述 | Similar to NRPD2: DNA-directed RNA polymerases IV and V subunit 2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_034820 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g23780 |
DNA 依赖性 RNA 聚合酶使用四种核糖核苷三磷酸作为底物催化 DNA 转录为 RNA。 |
Atypical RNA polymerase subunits required for RNA-directed DNA methylation.2005 · DOI: 10.1038/ng1580
|
At3g18090 |
DNA 依赖性 RNA 聚合酶使用四种核糖核苷三磷酸作为底物催化 DNA 转录为 RNA。 | 暂无已核实直接文献 |
At4g21710 |
DNA 依赖性 RNA 聚合酶使用四种核糖核苷三磷酸作为底物催化 DNA 转录为 RNA。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006354 | DNA-templated transcription elongation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006366 | transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.069; 覆盖度=100.575; E 值=0.0; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006367 | transcription initiation at RNA polymerase II promoter | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030422 | siRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031507 | heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035194 | regulatory ncRNA-mediated post-transcriptional gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035196 | miRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=33.95; 覆盖度=102.136; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050776 | regulation of immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080188 | gene silencing by siRNA-directed DNA methylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141007 | transposable element silencing by siRNA-mediated heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000418 | RNA polymerase IV complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000419 | RNA polymerase V complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000792 | heterochromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005665 | RNA polymerase II, core complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=33.95; 覆盖度=102.136; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030880 | RNA polymerase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003899 | DNA-directed RNA polymerase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032549 | ribonucleoside binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G18090 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=65.275; 覆盖度=86.606; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G23780 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.015; 覆盖度=99.753; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G21710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=33.95; 覆盖度=102.136; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0288257 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.069; 覆盖度=100.575; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |