基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_032325 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr07:20575880-20579610 (-) |
| 描述 | Similar to BHLH147: Transcription factor bHLH147 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_032325 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 12 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g17100 |
非典型 bHLH 转录因子,可能无法结合 DNA。 | 暂无已核实直接文献 |
At3g06590 |
bHLH转录因子,在靶基因启动子上的特定序列5'-CANNTG-3'结合DNA。 | 暂无已核实直接文献 |
At1g09250 |
非典型 bHLH 转录因子,可能无法结合 DNA。 | 暂无已核实直接文献 |
At3g05800 |
非典型 bHLH 转录因子,可能无法结合 DNA。 | |
At2g43060 |
非典型且可能不与 DNA 结合的 bHLH 转录因子,作为转录抑制因子,在响应赤霉素 (GA) 和油菜素甾醇 (BR) 信号时负向调控细胞和器官伸长。 |
Antagonistic HLH/bHLH transcription factors mediate brassinosteroid regulation of cell elongation and plant development in rice and Arabidopsis.2009 · DOI: 10.1105/tpc.109.070441 A triantagonistic basic helix-loop-helix system regulates cell elongation in Arabidopsis.2012 · DOI: 10.1105/tpc.112.105023
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.595; 覆盖度=43.767; E 值=3.39e-46; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.595; 覆盖度=43.767; E 值=3.39e-46; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.059; 覆盖度=47.091; E 值=9.7e-46; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.059; 覆盖度=47.091; E 值=9.7e-46; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=31.373; 覆盖度=42.382; E 值=2.26e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009742 | brassinosteroid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.59; 覆盖度=43.213; E 值=1.31e-26; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042542 | response to hydrogen peroxide | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.059; 覆盖度=47.091; E 值=9.7e-46; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.595; 覆盖度=43.767; E 值=3.39e-46; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.595; 覆盖度=43.767; E 值=3.39e-46; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.595; 覆盖度=43.767; E 值=3.39e-46; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.059; 覆盖度=47.091; E 值=9.7e-46; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046983 | protein dimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.595; 覆盖度=43.767; E 值=3.39e-46; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09250 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=43.75; 覆盖度=44.321; E 值=2.56e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G43060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=31.373; 覆盖度=42.382; E 值=2.26e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G05800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=43.59; 覆盖度=43.213; E 值=1.31e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G06590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=57.059; 覆盖度=47.091; E 值=9.7e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G17100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.595; 覆盖度=43.767; E 值=3.39e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release |