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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_032289
Query referenceOH1004
LocationChr07:19986916-19988451 (-)
DescriptionProtein of unknown function
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032289 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 7 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g72490 Involved in the regulation of root gravitropism.
DRO1 influences root system architecture in Arabidopsis and Prunus species.2017 · DOI: 10.1111/tpj.13470
The Arabidopsis LAZY1 Family Plays a Key Role in Gravity Signaling within Statocytes and in Branch Angle Control of Roots and Shoots.2017 · DOI: 10.1105/tpc.16.00575
LAZY Genes Mediate the Effects of Gravity on Auxin Gradients and Plant Architecture.2017 · DOI: 10.1104/pp.17.00942
AtDRO1 is nuclear localized in root tips under native conditions and impacts auxin localization.2020 · DOI: 10.1007/s11103-020-00984-2
At1g17400 Involved in the regulation of root gravitropism.
The Arabidopsis LAZY1 Family Plays a Key Role in Gravity Signaling within Statocytes and in Branch Angle Control of Roots and Shoots.2017 · DOI: 10.1105/tpc.16.00575
LAZY Genes Mediate the Effects of Gravity on Auxin Gradients and Plant Architecture.2017 · DOI: 10.1104/pp.17.00942

Rice

Reference gene IDPossible functionPapers / DOI
Os09g0439800 Involved in the control of root growth angle.
Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions.2013 · DOI: 10.1038/ng.2725

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009630gravitropismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.018; coverage=95.638; evalue=4.71e-71; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009958positive gravitropismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.175; coverage=88.255; evalue=1.71e-86; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0040008regulation of growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.175; coverage=88.255; evalue=1.71e-86; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080181lateral root branchingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.018; coverage=95.638; evalue=4.71e-71; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.018; coverage=95.638; evalue=4.71e-71; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.018; coverage=95.638; evalue=4.71e-71; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009501amyloplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.018; coverage=95.638; evalue=4.71e-71; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G17400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.392; coverage=97.651; evalue=2.52e-64UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G72490KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.018; coverage=95.638; evalue=4.71e-71UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os09g0439800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.962; coverage=88.926; evalue=5.87e-29UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmtr:25500557KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.846; coverage=87.248; evalue=5.22e-77UniProtKB/Swiss-Prot DAT 2026 current_release