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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_032228
Query referenceOH1004
LocationChr07:18908658-18910779 (+)
DescriptionSimilar to CCX4: Cation/calcium exchanger 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032228 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g54115 Membrane-localized H(+)-dependent K(+) and Na(+) transporter.
AtCCX3 is an Arabidopsis endomembrane H+ -dependent K+ transporter.2008 · DOI: 10.1104/pp.108.118810
At3g14070 May act as an endomembrane-localized, H⁺-dependent K⁺ and Na⁺ transporter.
AtCCX3 is an Arabidopsis endomembrane H+ -dependent K+ transporter.2008 · DOI: 10.1104/pp.108.118810
At5g17860 Vacuolar membrane-localized H(+)-dependent K(+) and Na(+) transporter. No verified direct reference in this release
At5g17850 Membrane-localized H(+)-dependent K(+) and Na(+) transporter. No verified direct reference in this release
At1g08960 May act as a membrane-localized, H⁺-dependent K⁺ and Na⁺ transporter.
Characterization of an AtCCX5 gene from Arabidopsis thaliana that involves in high-affinity K⁺ uptake and Na⁺ transport in yeast.2011 · DOI: 10.1016/j.bbrc.2011.09.030

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006812monoatomic cation transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006813potassium ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006814sodium ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006970response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.345; coverage=87.421; evalue=5.82e-116; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010150leaf senescenceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030003intracellular monoatomic cation homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043157response to cation stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071805potassium ion transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.509; coverage=88.994; evalue=2.01e-61; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005773vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005774vacuolar membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.345; coverage=87.421; evalue=5.82e-116; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.037; coverage=84.906; evalue=6.62e-138; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.345; coverage=87.421; evalue=5.82e-116; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010008endosome membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0012505endomembrane systemCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030659cytoplasmic vesicle membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034399nuclear peripheryCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.509; coverage=88.994; evalue=2.01e-61; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005384manganese ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008324monoatomic cation transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015079potassium ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015081sodium ion transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015297antiporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G08960KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.509; coverage=88.994; evalue=2.01e-61UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G54115KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.19; coverage=99.057; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G14070KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=56.598; coverage=98.899; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G17850KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.345; coverage=87.421; evalue=5.82e-116UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G17860KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.037; coverage=84.906; evalue=6.62e-138UniProtKB/Swiss-Prot DAT 2026 current_release