基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_032203 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr07:18573505-18574642 (-) |
| 描述 | Similar to MYB26: Transcription factor MYB26 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_032203 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g13890 |
可能是转录因子,调控花药内壁次生细胞壁增厚,这是花药裂开所必需的。 |
Disruption of Arabidopsis thaliana MYB26 results in male sterility due to non-dehiscent anthers.2003 · DOI: 10.1046/j.1365-313x.2003.01745.x
|
At5g26660 |
可能的转录因子。 | 暂无已核实直接文献 |
At1g09540 |
协调下游靶基因小型网络的转录因子;这些基因参与木质部形成、木质部细胞分化、侧根形成等多个植物生长发育过程。 |
AtMYB61, an R2R3-MYB transcription factor controlling stomatal aperture in Arabidopsis thaliana.2005 · DOI: 10.1016/j.cub.2005.06.041 MUM ENHANCERS are important for seed coat mucilage production and mucilage secretory cell differentiation in Arabidopsis thaliana.2009 · DOI: 10.1093/jxb/erp102 AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network.2012 · DOI: 10.1111/j.1469-8137.2012.04201.x
|
At3g08500 |
转录因子,在 NAC012/SND1 介导的转录网络中充当分子开关,调节次生壁生物合成。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.269; 覆盖度=58.049; E 值=1.51e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.269; 覆盖度=58.049; E 值=1.51e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.269; 覆盖度=58.049; E 值=1.51e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.807; 覆盖度=55.61; E 值=3.34e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010089 | xylem development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.807; 覆盖度=55.61; E 值=3.34e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010119 | regulation of stomatal movement | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.807; 覆盖度=55.61; E 值=3.34e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.807; 覆盖度=55.61; E 值=3.34e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=75.221; 覆盖度=55.122; E 值=2.28e-54; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=69.298; 覆盖度=55.61; E 值=1.82e-49; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.807; 覆盖度=55.61; E 值=3.34e-54; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000652 | regulation of secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=69.298; 覆盖度=55.61; E 值=1.82e-49; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.269; 覆盖度=58.049; E 值=1.51e-54; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.269; 覆盖度=58.049; E 值=1.51e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.521; 覆盖度=57.073; E 值=4.51e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.269; 覆盖度=58.049; E 值=1.51e-54; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=72.807; 覆盖度=55.61; E 值=3.34e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G08500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=69.298; 覆盖度=55.61; E 值=1.82e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G13890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.269; 覆盖度=58.049; E 值=1.51e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G26660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=75.221; 覆盖度=55.122; E 值=2.28e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release |