Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_031755`
Query reference	OH1004
Location	Chr07:10733710-10734456 (-)
Description	Similar to ZAT10: Zinc finger protein ZAT10 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_031755 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 28 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g27730`	Transcriptional repressor involved in abiotic stress responses.	LOS2, a genetic locus required for cold-responsive gene transcription encodes a bi-functional enolase.2002 · DOI: 10.1093/emboj/21.11.2692 Gain- and loss-of-function mutations in Zat10 enhance the tolerance of plants to abiotic stress.2006 · DOI: 10.1016/j.febslet.2006.11.002 Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells.2008 · DOI: 10.1073/pnas.0711203105 Fine-tuning of early events in the jasmonate response.2008 · DOI: 10.4161/psb.3.10.5993
`At5g04340`	Probable transcription factor that regulates root development and phosphate (Pi) acquisition and homeostasis.	Phosphate homeostasis and root development in Arabidopsis are synchronized by the zinc finger transcription factor ZAT6.2007 · DOI: 10.1104/pp.107.101691
`At5g43170`	Transcriptional repressor probably involved in abiotic stress responses.	Arabidopsis Cys2/His2-type zinc-finger proteins function as transcription repressors under drought, cold, and high-salinity stress conditions.2004 · DOI: 10.1104/pp.104.046599
`At3g19580`	Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions.	Functional identification of an Arabidopsis snf4 ortholog by screening for heterologous multicopy suppressors of snf4 deficiency in yeast.2000 · DOI: 10.1046/j.1365-313x.2000.00809.x Arabidopsis Cys2/His2-type zinc-finger proteins function as transcription repressors under drought, cold, and high-salinity stress conditions.2004 · DOI: 10.1104/pp.104.046599 Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells.2008 · DOI: 10.1073/pnas.0711203105 Arabidopsis zinc-finger protein 2 is a negative regulator of ABA signaling during seed germination.2010 · DOI: 10.1016/j.jplph.2010.05.010 Arabidopsis Cys2/His2 zinc-finger proteins AZF1 and AZF2 negatively regulate abscisic acid-repressive and auxin-inducible genes under abiotic stress conditions.2011 · DOI: 10.1104/pp.111.182683 Gene network analysis and functional studies of senescence-associated genes reveal novel regulators of Arabidopsis leaf senescence.2012 · DOI: 10.1111/j.1744-7909.2012.01136.x

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006979	response to oxidative stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009409	response to cold	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009611	response to wounding	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009644	response to high light intensity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009738	abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.706; coverage=109.677; evalue=2.23e-43; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009793	embryo development ending in seed dormancy	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.706; coverage=109.677; evalue=2.23e-43; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010117	photoprotection	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010200	response to chitin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015979	photosynthesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035264	multicellular organism growth	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042538	hyperosmotic salinity response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.154; coverage=99.597; evalue=5.85e-45; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045892	negative regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0055062	phosphate ion homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.394; coverage=102.419; evalue=3.59e-48; UniProt GO evidence=IGI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000280	regulation of root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.394; coverage=102.419; evalue=3.59e-48; UniProt GO evidence=IGI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.394; coverage=102.419; evalue=3.59e-48; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0001222	transcription corepressor binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.394; coverage=102.419; evalue=3.59e-48; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.154; coverage=99.597; evalue=5.85e-45; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G27730	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.588; coverage=102.823; evalue=2.18e-59	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G19580	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.706; coverage=109.677; evalue=2.23e-43	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G04340	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.394; coverage=102.419; evalue=3.59e-48	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G43170	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.154; coverage=99.597; evalue=5.85e-45	UniProtKB/Swiss-Prot DAT 2026 current_release