基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_031554 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr07:7607115-7616920 (+) |
| 描述 | Similar to FRS5: Protein FAR1-RELATED SEQUENCE 5 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_031554 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g38180 |
假定的转录激活剂参与调节发育的光控制。 | 暂无已核实直接文献 |
At4g15090 |
转录激活剂，可识别并结合 DNA 共有序列 5'-CACGCGC-3'。 | 暂无已核实直接文献 |
At1g52520 |
假定的转录激活剂参与调节发育的光控制。 | |
At3g22170 |
转录激活剂，可识别并结合 DNA 共有序列 5'-CACGCGC-3'。 |
Arabidopsis FHY3 defines a key phytochrome A signaling component directly interacting with its homologous partner FAR1.2002 · DOI: 10.1093/emboj/21.6.1339 The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway.2003 · DOI: 10.1046/j.1365-313x.2003.01741.x Arabidopsis FHY3 specifically gates phytochrome signaling to the circadian clock.2006 · DOI: 10.1105/tpc.105.037358 Transposase-derived transcription factors regulate light signaling in Arabidopsis.2007 · DOI: 10.1126/science.1146281
|
At5g28530 |
推定的FAR1-RELATED SEQUENCE 10蛋白。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=25.125; 覆盖度=64.554; E 值=9.29e-51; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=28.497; 覆盖度=62.191; E 值=6.48e-67; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=25.125; 覆盖度=64.554; E 值=9.29e-51; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009585 | red, far-red light phototransduction | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=25.125; 覆盖度=64.554; E 值=9.29e-51; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009639 | response to red or far red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010017 | red or far-red light signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010018 | far-red light signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010218 | response to far red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042753 | positive regulation of circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900056 | negative regulation of leaf senescence | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=28.497; 覆盖度=62.191; E 值=6.48e-67; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=25.125; 覆盖度=64.554; E 值=9.29e-51; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=28.497; 覆盖度=62.191; E 值=6.48e-67; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G52520 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.702; 覆盖度=61.547; E 值=1.34e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G22170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=25.125; 覆盖度=64.554; E 值=9.29e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G15090 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=26.937; 覆盖度=61.01; E 值=4.56e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G38180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=28.497; 覆盖度=62.191; E 值=6.48e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G28530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=26.516; 覆盖度=61.976; E 值=1.28e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release |