基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_031190 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr07:2009145-2010429 (-) |
| 描述 | Similar to TRM9: tRNA (carboxymethyluridine(34)-5-O)-methyltransferase (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_031190 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 4 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g36310 |
通过其甲基转移酶结构域，在 tRNA 中反密码子环的摆动位置催化 5-羧甲基尿苷甲基化为 5-甲基羧甲基尿苷。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002098 | tRNA wobble uridine modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.778; 覆盖度=87.258; E 值=2.88e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030488 | tRNA methylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.778; 覆盖度=87.258; E 值=2.88e-63; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.94; 覆盖度=82.548; E 值=1.79e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043527 | tRNA methyltransferase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.778; 覆盖度=87.258; E 值=2.88e-63; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000049 | tRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005506 | iron ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.94; 覆盖度=82.548; E 值=1.79e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008175 | tRNA methyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.94; 覆盖度=82.548; E 值=1.79e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016300 | tRNA (uridine) methyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.94; 覆盖度=82.548; E 值=1.79e-63; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.778; 覆盖度=87.258; E 值=2.88e-63; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106335 | tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G36310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=68.278; 覆盖度=91.69; E 值=2.38e-156 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:781788 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.278; 覆盖度=99.723; E 值=3.78e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:67667 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.778; 覆盖度=87.258; E 值=2.88e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:550051 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=40.94; 覆盖度=82.548; E 值=1.79e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release |