Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_030530 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:118175885-118176747 (-) |
| Description | Similar to REV7: DNA polymerase zeta processivity subunit (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_030530 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 39 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g16590 |
Regulatory subunit of the error prone DNA polymerase zeta. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001558 | regulation of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.957; coverage=96.373; evalue=3.83e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=102.591; evalue=5.26e-66; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.957; coverage=96.373; evalue=3.83e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=102.591; evalue=5.26e-66; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007015 | actin filament organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009794 | regulation of mitotic cell cycle, embryonic | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=102.591; evalue=5.26e-66; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010944 | negative regulation of transcription by competitive promoter binding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019985 | translesion synthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031145 | anaphase-promoting complex-dependent catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=NAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031397 | negative regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042177 | negative regulation of protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042276 | error-prone translesion synthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042772 | DNA damage response, signal transduction resulting in transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043393 | regulation of protein binding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090090 | negative regulation of canonical Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901203 | positive regulation of extracellular matrix assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904667 | negative regulation of ubiquitin protein ligase activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000042 | negative regulation of double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000048 | negative regulation of cell-cell adhesion mediated by cadherin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001034 | positive regulation of double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=102.591; evalue=5.26e-66; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005680 | anaphase-promoting complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016035 | zeta DNA polymerase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=102.591; evalue=5.26e-66; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090734 | site of DNA damage | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008432 | JUN kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.882; coverage=96.373; evalue=9.49e-21; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G16590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=48.485; coverage=102.591; evalue=5.26e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:506605 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.882; coverage=96.373; evalue=9.49e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:313702 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.344; coverage=96.373; evalue=2.5e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:394380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.957; coverage=96.373; evalue=1.92e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:448122 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.957; coverage=96.373; evalue=3.83e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release |