Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029836 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:101624276-101626090 (-) |
| Description | Similar to CLPR4: ATP-dependent Clp protease proteolytic subunit-related protein 4%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029836 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g17040 |
Involved in plastid protein homeostasis. | No verified direct reference in this release |
At1g09130 |
ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000302 | response to reactive oxygen species | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=49.741; coverage=63.907; evalue=2.6e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.826; coverage=60.927; evalue=1.46e-57; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=49.741; coverage=63.907; evalue=2.6e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009368 | endopeptidase Clp complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009532 | plastid stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009579 | thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=49.741; coverage=63.907; evalue=2.6e-56; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004176 | ATP-dependent peptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004252 | serine-type endopeptidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051117 | ATPase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=49.741; coverage=63.907; evalue=2.6e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G17040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.712; coverage=85.099; evalue=5.75e-155 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | eba:ebA4970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.395; coverage=71.192; evalue=2.01e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syf:Synpcc7942_2538 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.826; coverage=60.927; evalue=1.46e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:slr0164 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.97; coverage=65.563; evalue=9.36e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release |