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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_029218
Query referenceOH1004
LocationChr06:83953172-83957290 (+)
DescriptionSimilar to At1g32090: CSC1-like protein At1g32090 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_029218 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g32090 Acts as an osmosensitive calcium-permeable cation channel. No verified direct reference in this release
At3g21620 Acts as an osmosensitive calcium-permeable cation channel. No verified direct reference in this release
At4g22120 Acts as an osmosensitive calcium-permeable cation channel.
OSCA/TMEM63 are an Evolutionarily Conserved Family of Mechanically Activated Ion Channels.2018 · DOI: 10.7554/elife.41844
Structure-guided mutagenesis of OSCAs reveals differential activation to mechanical stimuli.2024 · DOI: 10.7554/elife.93147
At4g02900 Calcium-permeable channel involved in plant stomatal immunity. No verified direct reference in this release
At1g11960 Calcium-permeable channel that plays a key role in plant stomatal immunity.
The calcium-permeable channel OSCA1.3 regulates plant stomatal immunity.2020 · DOI: 10.1038/s41586-020-2702-1

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006812monoatomic cation transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.209; coverage=92.606; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010118stomatal movementBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.158; coverage=91.879; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045087innate immune responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.399; coverage=92.848; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140426pathogen-associated molecular pattern receptor signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.158; coverage=91.879; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.399; coverage=92.848; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005227calcium-activated cation channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005262calcium channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.158; coverage=91.879; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008381mechanosensitive monoatomic ion channel activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.209; coverage=92.606; evalue=0.0; UniProt GO evidence=IPI:IntActUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G11960KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.158; coverage=91.879; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G32090KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.516; coverage=98.667; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G21620KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.415; coverage=89.333; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G02900KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.399; coverage=92.848; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G22120KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.209; coverage=92.606; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release