Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029167 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:82136859-82140548 (+) |
| Description | Similar to SMC4: Structural maintenance of chromosomes protein 4 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029167 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 25 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g48600 |
Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000012 | single strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=TAS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000070 | mitotic sister chromatid segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.902; coverage=63.763; evalue=2.24e-38; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007076 | mitotic chromosome condensation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010032 | meiotic chromosome condensation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045132 | meiotic chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048468 | cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051383 | kinetochore organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051984 | positive regulation of chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905820 | positive regulation of chromosome separation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905821 | positive regulation of chromosome condensation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000775 | chromosome, centromeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000794 | condensed nuclear chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000796 | condensin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.902; coverage=63.763; evalue=2.24e-38; UniProt GO evidence=ISS:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031981 | nuclear lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.82; coverage=62.021; evalue=4.63e-36; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G48600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.327; coverage=59.582; evalue=3.51e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0286403 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.902; coverage=63.763; evalue=2.24e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:70099 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.304; coverage=63.066; evalue=2.21e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:397799 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.258; coverage=62.021; evalue=5.23e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release |