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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_028980
Query referenceOH1004
LocationChr06:76876372-76877424 (-)
DescriptionSimilar to SRC2: Protein SRC2 (Glycine max OX%3D3847)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028980 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 11 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g09070 May act as an activator of the calcium-dependent activation of RBOHF that mediates reactive oxygen species (ROS) production and may play a role in cold responses.
A low temperature-inducible protein AtSRC2 enhances the ROS-producing activity of NADPH oxidase AtRbohF.2013 · DOI: 10.1016/j.bbamcr.2013.06.024
At3g55470 Binds to both sense and antisense RNA.
Solution NMR Structure and Backbone Dynamics of Partially Disordered Arabidopsis thaliana Phloem Protein 16-1, a Putative mRNA Transporter.2018 · DOI: 10.1021/acs.biochem.7b01071

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006623protein targeting to vacuoleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.54; coverage=90.0; evalue=5.51e-45; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.02; coverage=100.286; evalue=2.86e-46; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071456cellular response to hypoxiaBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.54; coverage=90.0; evalue=5.51e-45; UniProt GO evidence=HEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000326protein storage vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.54; coverage=90.0; evalue=5.51e-45; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.54; coverage=90.0; evalue=5.51e-45; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.54; coverage=90.0; evalue=5.51e-45; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005789endoplasmic reticulum membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.02; coverage=100.286; evalue=2.86e-46; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.02; coverage=100.286; evalue=2.86e-46; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032586protein storage vacuole membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.02; coverage=100.286; evalue=2.86e-46; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.417; coverage=41.143; evalue=1.81e-07; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.417; coverage=41.143; evalue=1.81e-07; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G09070KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.54; coverage=90.0; evalue=5.51e-45UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G55470KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=35.417; coverage=41.143; evalue=1.81e-07UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGgmx:547451KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.02; coverage=100.286; evalue=2.86e-46UniProtKB/Swiss-Prot DAT 2026 current_release