Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_028958 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:75925477-75931438 (+) |
| Description | Similar to CHR17: ISWI chromatin-remodeling complex ATPase CHR17 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028958 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 63 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g18620 |
Possesses intrinsic ATP-dependent nucleosome-remodeling activity. | |
At3g06400 |
Possesses intrinsic ATP-dependent nucleosome-remodeling activity. |
CHR11, a chromatin-remodeling factor essential for nuclear proliferation during female gametogenesis in Arabidopsis thaliana.2005 · DOI: 10.1073/pnas.0508186102
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0367900 |
Possesses intrinsic ATP-dependent nucleosome-remodeling activity. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000183 | rDNA heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006275 | regulation of DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006325 | chromatin organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006334 | nucleosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006338 | chromatin remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISS:HGNC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006346 | DNA methylation-dependent constitutive heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006352 | DNA-templated transcription initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009553 | embryo sac development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009561 | megagametogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016479 | negative regulation of transcription by RNA polymerase I | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031507 | heterochromatin formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045740 | positive regulation of DNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISS:HGNC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045943 | positive regulation of transcription by RNA polymerase I | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045945 | positive regulation of transcription by RNA polymerase III | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051510 | regulation of unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140374 | antiviral innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900036 | positive regulation of cellular response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905213 | negative regulation of mitotic chromosome condensation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990830 | cellular response to leukemia inhibitory factor | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IEP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000177 | regulation of neural precursor cell proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000793 | condensed chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000812 | Swr1 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001650 | fibrillar center | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005677 | chromatin silencing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005721 | pericentric heterochromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016589 | NURF complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016590 | ACF complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031010 | ISWI-type complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031213 | RSF complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043596 | nuclear replication fork | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090535 | WICH complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090537 | CERF complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0110016 | B-WICH complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904949 | ATPase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031491 | nucleosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036310 | ATP-dependent DNA/DNA annealing activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140658 | ATP-dependent chromatin remodeler activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140750 | nucleosome array spacer activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0; UniProt GO evidence=IMP:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G06400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=85.102; coverage=99.352; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G18620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=85.37; coverage=99.907; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0367900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=86.323; coverage=93.34; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:93761 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=54.792; coverage=88.807; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:93762 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.105; coverage=87.882; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |