基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_026855 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr06:3922854-3924258 (-) |
| 描述 | Similar to SMC6B: Structural maintenance of chromosomes protein 6B (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_026855 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g61460 |
SMC5-SMC6复合物的核心组分,促进DNA损伤后的姊妹染色单体排列,并通过姊妹染色单体间的同源重组促进双链DNA断裂(DSBs)的修复。 | 暂无已核实直接文献 |
At2g38280 |
AMP 脱氨酶在能量代谢中起着至关重要的作用。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os07g0693500 |
AMP 脱氨酶在能量代谢中起着至关重要的作用。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000724 | double-strand break repair via homologous recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006188 | IMP biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007062 | sister chromatid cohesion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=67.568; 覆盖度=22.699; E 值=7.64e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010165 | response to X-ray | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032264 | IMP salvage | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046033 | AMP metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005741 | mitochondrial outer membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=67.568; 覆盖度=22.699; E 值=7.64e-06; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=67.568; 覆盖度=22.699; E 值=7.64e-06; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=67.568; 覆盖度=22.699; E 值=7.64e-06; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030915 | Smc5-Smc6 complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003684 | damaged DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003876 | AMP deaminase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043424 | protein histidine kinase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=67.568; 覆盖度=22.699; E 值=7.64e-06; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G38280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=67.568; 覆盖度=22.699; E 值=7.64e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G61460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.5; 覆盖度=24.54; E 值=6.82e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0693500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.529; 覆盖度=41.718; E 值=4.26e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |