基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_026703 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr06:1627715-1629354 (+) |
| 描述 | Similar to RPL5: 50S ribosomal protein L5%2C chloroplastic (Spinacia oleracea OX%3D3562) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_026703 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g01310 |
与 5S rRNA 结合,形成 50S 亚基中央突起的一部分。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0125000 |
与 5S rRNA 结合,形成 50S 亚基中央突起的一部分。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006412 | translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.678; 覆盖度=88.258; E 值=6.07e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005762 | mitochondrial large ribosomal subunit | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.678; 覆盖度=88.258; E 值=6.07e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.681; 覆盖度=99.621; E 值=5.37e-125; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005840 | ribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.674; 覆盖度=67.424; E 值=3.7e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.678; 覆盖度=88.258; E 值=6.07e-128; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.681; 覆盖度=99.621; E 值=5.37e-125; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.681; 覆盖度=99.621; E 值=5.37e-125; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022625 | cytosolic large ribosomal subunit | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.322; 覆盖度=67.045; E 值=1.76e-76; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022626 | cytosolic ribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.681; 覆盖度=99.621; E 值=5.37e-125; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.674; 覆盖度=67.424; E 值=3.7e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000049 | tRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.674; 覆盖度=67.424; E 值=3.7e-77; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.678; 覆盖度=88.258; E 值=6.07e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.681; 覆盖度=99.621; E 值=5.37e-125; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003735 | structural constituent of ribosome | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.678; 覆盖度=88.258; E 值=6.07e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019843 | rRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.678; 覆盖度=88.258; E 值=6.07e-128; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G01310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=67.681; 覆盖度=99.621; E 值=5.37e-125 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cyn:Cyan7425_1304 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.674; 覆盖度=67.424; E 值=3.7e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0125000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=64.352; 覆盖度=81.818; E 值=7.01e-102 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:sll1808 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=59.322; 覆盖度=67.045; E 值=1.76e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release |