基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_026608 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:129447158-129451904 (-) |
| 描述 | Similar to MSH4: DNA mismatch repair protein MSH4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_026608 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 27 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g17380 |
参与与 MSH5 相关的减数分裂重组。 |
The Arabidopsis MutS homolog AtMSH4 functions at an early step in recombination: evidence for two classes of recombination in Arabidopsis.2004 · DOI: 10.1101/gad.317504
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006298 | mismatch repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.474; 覆盖度=100.245; E 值=3.4e-142; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007129 | homologous chromosome pairing at meiosis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.185; 覆盖度=100.735; E 值=1.01e-134; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007292 | female gamete generation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.185; 覆盖度=100.735; E 值=1.01e-134; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010777 | meiotic mismatch repair involved in reciprocal meiotic recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045143 | homologous chromosome segregation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.185; 覆盖度=100.735; E 值=1.01e-134; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000228 | nuclear chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=28.854; 覆盖度=93.015; E 值=3.46e-73; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000793 | condensed chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.185; 覆盖度=100.735; E 值=1.01e-134; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000794 | condensed nuclear chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000795 | synaptonemal complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.474; 覆盖度=100.245; E 值=3.4e-142; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.185; 覆盖度=100.735; E 值=1.01e-134; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.474; 覆盖度=100.245; E 值=3.4e-142; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005713 | recombination nodule | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.474; 覆盖度=100.245; E 值=3.4e-142; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.565; 覆盖度=73.775; E 值=1.29e-70; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043073 | germ cell nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0062128 | MutSgamma complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=28.854; 覆盖度=93.015; E 值=3.46e-73; UniProt GO evidence=IPI:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990391 | DNA repair complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.185; 覆盖度=100.735; E 值=1.01e-134; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.474; 覆盖度=100.245; E 值=3.4e-142; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003684 | damaged DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.565; 覆盖度=73.775; E 值=1.29e-70; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003690 | double-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030983 | mismatched DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140664 | ATP-dependent DNA damage sensor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G17380 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=74.785; 覆盖度=99.632; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cya:CYA_2035 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.565; 覆盖度=73.775; E 值=1.29e-70 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4438 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.474; 覆盖度=100.245; E 值=3.4e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:55993 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.185; 覆盖度=100.735; E 值=1.01e-134 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YFL003C | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=28.854; 覆盖度=93.015; E 值=3.46e-73 | UniProtKB/Swiss-Prot DAT 2026 current_release |