基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_026244 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:123697979-123699441 (+) |
| 描述 | Similar to NAC043: NAC domain-containing protein 43 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_026244 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g46770 |
参与次生壁生物合成的基因转录激活剂。 |
The NAC transcription factors NST1 and NST2 of Arabidopsis regulate secondary wall thickenings and are required for anther dehiscence.2005 · DOI: 10.1105/tpc.105.036004 NAC transcription factors, NST1 and NST3, are key regulators of the formation of secondary walls in woody tissues of Arabidopsis.2007 · DOI: 10.1105/tpc.106.047043
|
At1g32770 |
参与二级细胞壁生物合成基因的转录激活因子。 |
SND1, a NAC domain transcription factor, is a key regulator of secondary wall synthesis in fibers of Arabidopsis.2006 · DOI: 10.1105/tpc.106.047399 NAC transcription factors, NST1 and NST3, are key regulators of the formation of secondary walls in woody tissues of Arabidopsis.2007 · DOI: 10.1105/tpc.106.047043
|
At3g61910 |
参与次生壁生物合成的基因转录激活剂。 | |
At2g18060 |
转录激活因子,可结合靶基因启动子中的次级细胞壁NAC结合元件(SNBE),序列为5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3'(按相似性推测)。 | |
At4g10350 |
转录激活剂。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=49.346; 覆盖度=84.298; E 值=8.51e-89; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010047 | fruit dehiscence | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=64.356; 覆盖度=55.647; E 值=2.21e-88; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048759 | xylem vessel member cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=49.346; 覆盖度=84.298; E 值=8.51e-89; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048829 | root cap development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=64.356; 覆盖度=55.647; E 值=2.21e-88; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=49.346; 覆盖度=84.298; E 值=8.51e-89; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901348 | positive regulation of secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=49.346; 覆盖度=84.298; E 值=8.51e-89; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.452; 覆盖度=85.399; E 值=3.15e-105; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.452; 覆盖度=85.399; E 值=3.15e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G32770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=56.452; 覆盖度=85.399; E 值=3.15e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G18060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=49.346; 覆盖度=84.298; E 值=8.51e-89 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G46770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.272; 覆盖度=86.226; E 值=3.61e-107 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=54.0; 覆盖度=82.645; E 值=6.55e-100 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G10350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=64.356; 覆盖度=55.647; E 值=2.21e-88 | UniProtKB/Swiss-Prot DAT 2026 current_release |