基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

基因 ID	`LXL04_025939`
当前查询版本	OH1004
位置	Chr05:118757160-118759351 (-)
描述	Similar to NAC098: Protein CUP-SHAPED COTYLEDON 2 (Arabidopsis thaliana OX%3D3702)
注释来源组装	GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_025939 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 35 条 GO 注释和 6 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID	可能功能	对应论文 / DOI
`At5g53950`	STM 和 KNAT6 转录激活剂。	Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes.1999 · DOI: 10.1242/dev.126.8.1563 Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana.2000 · DOI: 10.1093/pcp/41.1.60 Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo.2002 · DOI: 10.1242/dev.129.17.3965 The CUP-SHAPED COTYLEDON genes promote adventitious shoot formation on calli.2003 · DOI: 10.1093/pcp/pcg038 MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs.2004 · DOI: 10.1016/j.cub.2004.06.022 MicroRNA regulation of the CUC genes is required for boundary size control in Arabidopsis meristems.2004 · DOI: 10.1242/dev.01320 The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.2005 · DOI: 10.1016/j.cub.2005.02.017 KNAT6: an Arabidopsis homeobox gene involved in meristem activity and organ separation.2006 · DOI: 10.1105/tpc.106.041988 The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis.2006 · DOI: 10.1105/tpc.106.045617 Arabidopsis CUP-SHAPED COTYLEDON3 regulates postembryonic shoot meristem and organ boundary formation.2006 · DOI: 10.1105/tpc.106.045716 Plants expressing a miR164-resistant CUC2 gene reveal the importance of post-meristematic maintenance of phyllotaxy in Arabidopsis.2007 · DOI: 10.1242/dev.02774 Redundancy and specialization among plant microRNAs: role of the MIR164 family in developmental robustness.2007 · DOI: 10.1242/dev.02817 Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant.1997 · DOI: 10.1105/tpc.9.6.841
`At5g61430`	结合于参与叶绿素分解过程基因的启动子区域，如NYC1、SGR1、SGR2和PAO。	暂无已核实直接文献
`At5g07680`	含NAC结构域的蛋白79。	暂无已核实直接文献
`At5g39610`	转录激活因子，可结合靶基因启动子上的特定双部分基序 5'-[ACG][CA]GT[AG](5-6n)[CT]AC[AG]-3'。	The delayed leaf senescence mutants of Arabidopsis, ore1, ore3, and ore9 are tolerant to oxidative stress.2004 · DOI: 10.1093/pcp/pch110 Trifurcate feed-forward regulation of age-dependent cell death involving miR164 in Arabidopsis.2009 · DOI: 10.1126/science.1166386 Forward and reverse genetics to identify genes involved in the age-related resistance response in Arabidopsis thaliana.2009 · DOI: 10.1111/j.1364-3703.2009.00557.x A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence.2010 · DOI: 10.1111/j.1365-313x.2010.04151.x ORS1, an H₂O₂-responsive NAC transcription factor, controls senescence in Arabidopsis thaliana.2011 · DOI: 10.1093/mp/ssq080 NAC transcription factor ORE1 and senescence-induced BIFUNCTIONAL NUCLEASE1 (BFN1) constitute a regulatory cascade in Arabidopsis.2013 · DOI: 10.1093/mp/sst012 ORE1 balances leaf senescence against maintenance by antagonizing G2-like-mediated transcription.2013 · DOI: 10.1038/embor.2013.24

水稻

参考基因 ID	可能功能	对应论文 / DOI
`Os04g0460600`	转录因子参与分蘖芽生长的调节，但似乎不调节分蘖芽的萌发。	Overexpression of a NAC-domain protein promotes shoot branching in rice.2007 · DOI: 10.1111/j.1469-8137.2007.02177.x OsNAC2 encoding a NAC transcription factor that affects plant height through mediating the gibberellic acid pathway in rice.2015 · DOI: 10.1111/tpj.12819 A Rice NAC Transcription Factor Promotes Leaf Senescence via ABA Biosynthesis.2017 · DOI: 10.1104/pp.17.00542 Overexpression of miR164b-resistant OsNAC2 improves plant architecture and grain yield in rice.2018 · DOI: 10.1093/jxb/ery017 OsNAC2 positively affects salt-induced cell death and binds to the OsAP37 and OsCOX11 promoters.2018 · DOI: 10.1111/tpj.13867 OsNAC2 integrates auxin and cytokinin pathways to modulate rice root development.2020 · DOI: 10.1111/pbi.13209 Overexpression of a microRNA-targeted NAC transcription factor improves drought and salt tolerance in Rice via ABA-mediated pathways.2019 · DOI: 10.1186/s12284-019-0334-6 OsNAC2 Is Involved in Multiple Hormonal Pathways to Mediate Germination of Rice Seeds and Establishment of Seedling.2021 · DOI: 10.3389/fpls.2021.699303

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型	ID	名称	命名空间	证据	来源
GO	GO:0006351	DNA-templated transcription	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006979	response to oxidative stress	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009723	response to ethylene	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009733	response to auxin	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009734	auxin-activated signaling pathway	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009738	abscisic acid-activated signaling pathway	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009740	gibberellic acid mediated signaling pathway	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009873	ethylene-activated signaling pathway	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010029	regulation of seed germination	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010072	primary shoot apical meristem specification	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010150	leaf senescence	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010223	secondary shoot formation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010468	regulation of gene expression	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042542	response to hydrogen peroxide	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043068	positive regulation of programmed cell death	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048366	leaf development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048527	lateral root development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080187	floral organ senescence	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090400	stress-induced premature senescence	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090691	formation of plant organ boundary	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090709	regulation of timing of plant organ formation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900057	positive regulation of leaf senescence	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902074	response to salt	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1904250	positive regulation of age-related resistance	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990641	response to iron ion starvation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.767; 覆盖度=50.146; E 值=2.5e-81; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G07680	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=67.039; 覆盖度=52.187; E 值=7.25e-80	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G39610	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=65.363; 覆盖度=52.187; E 值=2.3e-77	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G53950	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=72.327; 覆盖度=46.356; E 值=6.37e-82	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G61430	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.767; 覆盖度=50.146; E 值=2.5e-81	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0460600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4336052	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=63.187; 覆盖度=53.061; E 值=1.59e-76	UniProtKB/Swiss-Prot DAT 2026 current_release