基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_025866 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:117923469-117926065 (+) |
| 描述 | Similar to YUC6: Indole-3-pyruvate monooxygenase YUCCA6 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_025866 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 24 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g25620 |
通过吲哚-3-丙酮酸 途径参与生长素生物合成。 |
Auxin biosynthesis by the YUCCA flavin monooxygenases controls the formation of floral organs and vascular tissues in Arabidopsis.2006 · DOI: 10.1101/gad.1415106 yucca6, a dominant mutation in Arabidopsis, affects auxin accumulation and auxin-related phenotypes.2007 · DOI: 10.1104/pp.107.104935
|
At4g13260 |
参与生长素生物合成。 | |
At1g04180 |
参与生长素生物合成。 | 暂无已核实直接文献 |
At1g04610 |
参与生长素生物合成。 | 暂无已核实直接文献 |
At5g11320 |
参与生长素生物合成。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006979 | response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009635 | response to herbicide | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=62.01; 覆盖度=95.55; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009819 | drought recovery | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009851 | auxin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010038 | response to metal ion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010262 | somatic embryogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=65.764; 覆盖度=95.082; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=65.764; 覆盖度=95.082; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004497 | monooxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004499 | N,N-dimethylaniline monooxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047134 | protein-disulfide reductase [NAD(P)H] activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047434 | indolepyruvate decarboxylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050660 | flavin adenine dinucleotide binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050661 | NADP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0103075 | indole-3-pyruvate monooxygenase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G04180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=62.01; 覆盖度=95.55; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G04610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.302; 覆盖度=93.208; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G13260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=65.764; 覆盖度=95.082; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G11320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=60.733; 覆盖度=89.461; E 值=5.81e-177 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G25620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=67.883; 覆盖度=96.253; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |