Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_025832 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:117419288-117424078 (-) |
| Description | Similar to TBL2: Protein trichome birefringence-like 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025832 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g60790 |
May act as a bridging protein that binds pectin and other cell wall polysaccharides. | No verified direct reference in this release |
At5g06700 |
Required during cellulose deposition. | No verified direct reference in this release |
At3g12060 |
Can complement TBR and is therefore functionally equivalent, but may work in different tissue. | No verified direct reference in this release |
At5g49340 |
May act as a bridging protein that binds pectin and other cell wall polysaccharides. | No verified direct reference in this release |
At5g20590 |
May act as a bridging protein that binds pectin and other cell wall polysaccharides. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009827 | plant-type cell wall modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.89; coverage=44.082; evalue=1.03e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030244 | cellulose biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.89; coverage=44.082; evalue=1.03e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045489 | pectin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.89; coverage=44.082; evalue=1.03e-142; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=42.271; evalue=2.03e-123; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.89; coverage=44.082; evalue=1.03e-142; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.89; coverage=44.082; evalue=1.03e-142; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.318; coverage=42.512; evalue=3.18e-179; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005802 | trans-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.89; coverage=44.082; evalue=1.03e-142; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=42.271; evalue=2.03e-123; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.318; coverage=42.512; evalue=3.18e-179; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008374 | O-acyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.318; coverage=42.512; evalue=3.18e-179; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016413 | O-acetyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.318; coverage=42.512; evalue=3.18e-179; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G60790 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.318; coverage=42.512; evalue=3.18e-179 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G12060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.054; coverage=44.686; evalue=1.59e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G06700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.89; coverage=44.082; evalue=1.03e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G20590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=42.271; evalue=2.03e-123 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G49340 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.087; coverage=44.444; evalue=6.65e-126 | UniProtKB/Swiss-Prot DAT 2026 current_release |