基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_025383 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:110890783-110892490 (-) |
| 描述 | Similar to RF2b: Transcription factor RF2b (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_025383 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g38900 |
转录因子,作为生殖发育、分生组织大小和植物生长的抑制因子。 | |
At2g21230 |
转录因子,作为生殖发育、分生组织大小和植物生长的抑制因子。 | |
At2g31370 |
推测具有激活作用的转录因子。 | 暂无已核实直接文献 |
At2g40620 |
可能与 bZIP34 一起参与花粉发育的配子体控制的转录因子。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0336200 |
转录因子可能参与维管发育和芽组织组织。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010628 | positive regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.089; 覆盖度=92.181; E 值=2.16e-96; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010629 | negative regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.089; 覆盖度=92.181; E 值=2.16e-96; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090567 | reproductive shoot system development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=65.041; 覆盖度=25.309; E 值=4.44e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=65.041; 覆盖度=25.309; E 值=4.44e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=66.165; 覆盖度=27.366; E 值=3.02e-46; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031490 | chromatin DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=65.041; 覆盖度=25.309; E 值=4.44e-43; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G21230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.089; 覆盖度=92.181; E 值=2.16e-96 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G31370 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=42.909; 覆盖度=56.584; E 值=1.66e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G40620 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=65.041; 覆盖度=25.309; E 值=4.44e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G38900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.348; 覆盖度=108.642; E 值=1.65e-122 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0336200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=66.165; 覆盖度=27.366; E 值=3.02e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release |