Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_024358 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:88425826-88426891 (-) |
| Description | Similar to SCE1: SUMO-conjugating enzyme SCE1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024358 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 39 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g57870 |
May catalyze covalent conjugation of SUMO to target proteins. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=TAS:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007059 | chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010469 | regulation of signaling receptor activity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016925 | protein sumoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030335 | positive regulation of cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033145 | positive regulation of intracellular steroid hormone receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051168 | nuclear export | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051170 | import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001650 | fibrillar center | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.821; coverage=97.5; evalue=2.03e-76; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106068 | SUMO ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990234 | transferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001221 | transcription coregulator binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019789 | SUMO transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019900 | kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032183 | SUMO binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035255 | ionotropic glutamate receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043398 | HLH domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043425 | bHLH transcription factor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=IPI:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044388 | small protein activating enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061656 | SUMO conjugating enzyme activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071535 | RING-like zinc finger domain binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G57870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.25; coverage=100.0; evalue=2.59e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0287693 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.821; coverage=97.5; evalue=2.03e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:25573 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.744; coverage=97.5; evalue=5.3e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:108703134 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.744; coverage=97.5; evalue=5.3e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:380450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.744; coverage=97.5; evalue=5.3e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:549162 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.744; coverage=97.5; evalue=5.3e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release |