Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022575 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:1730301-1732737 (+) |
| Description | Similar to ATG6: Beclin-1-like protein (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022575 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 29 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g61710 |
Required for normal plant development. |
An Arabidopsis homolog of yeast ATG6/VPS30 is essential for pollen germination.2007 · DOI: 10.1104/pp.106.093864 Arabidopsis AtBECLIN 1/AtAtg6/AtVps30 is essential for pollen germination and plant development.2007 · DOI: 10.1038/cr.2007.7
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000045 | autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000423 | mitophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006623 | protein targeting to vacuole | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IMP:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006995 | cellular response to nitrogen starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009846 | pollen germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010508 | positive regulation of autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.066; coverage=62.218; evalue=1.44e-64; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032465 | regulation of cytokinesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.485; coverage=82.519; evalue=7.08e-65; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045022 | early endosome to late endosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045324 | late endosome to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.485; coverage=82.519; evalue=7.08e-65; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090398 | cellular senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IGI:ZFIN | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000407 | phagophore assembly site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005776 | autophagosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005942 | phosphatidylinositol 3-kinase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031966 | mitochondrial membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034271 | phosphatidylinositol 3-kinase complex, class III, type I | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034272 | phosphatidylinositol 3-kinase complex, class III, type II | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043548 | phosphatidylinositol 3-kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G61710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.398; coverage=96.805; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0288021 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.066; coverage=62.218; evalue=1.44e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:393846 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.41; coverage=82.143; evalue=2.52e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:444178 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=33.485; coverage=82.519; evalue=7.08e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:619357 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.485; coverage=82.519; evalue=1.42e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release |