Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022523 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:152192553-152192960 (-) |
| Description | Similar to SLY1: SEC1 family transport protein SLY1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022523 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 19 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g17980 |
May be involved in the early secretory pathway. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0620800 |
May be involved in the early secretory pathway. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001666 | response to hypoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=99.259; evalue=8.13e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=99.259; evalue=8.13e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=99.259; evalue=8.13e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006892 | post-Golgi vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009636 | response to toxic substance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051223 | regulation of protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.31; coverage=85.926; evalue=2.99e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060628 | regulation of ER to Golgi vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902902 | negative regulation of autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.31; coverage=85.926; evalue=2.99e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=99.259; evalue=8.13e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=99.259; evalue=8.13e-54; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.31; coverage=85.926; evalue=2.99e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005798 | Golgi-associated vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005801 | cis-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.31; coverage=85.926; evalue=2.99e-08; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032580 | Golgi cisterna membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.31; coverage=85.926; evalue=2.99e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000149 | SNARE binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08; UniProt GO evidence=ISS:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G17980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=99.259; evalue=8.13e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0288719 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.0; coverage=88.889; evalue=6.46e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG3539 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.252; coverage=88.148; evalue=2.64e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0620800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.237; coverage=102.963; evalue=7.94e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:23256 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.31; coverage=85.926; evalue=2.99e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |