Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022508 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:151783617-151785908 (+) |
| Description | Similar to RR21: Two-component response regulator ORR21 (Oryza sativa subsp. indica OX%3D39946) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022508 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 29 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g16110 |
Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. |
The response regulator ARR2: a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis.2001 · DOI: 10.1007/s004380000400
|
At3g16857 |
Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. | |
At2g01760 |
Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: A2XE31 |
Transcriptional activator that binds specific DNA sequence. | No verified direct reference in this release |
Os03g0224200 |
Transcriptional activator that binds specific DNA sequence. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000160 | phosphorelay signal transduction system | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.53; coverage=88.934; evalue=8.14e-137; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.53; coverage=88.934; evalue=8.14e-137; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009735 | response to cytokinin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009736 | cytokinin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.53; coverage=88.934; evalue=8.14e-137; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009873 | ethylene-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010082 | regulation of root meristem growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010119 | regulation of stomatal movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010380 | regulation of chlorophyll biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010492 | maintenance of shoot apical meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031537 | regulation of anthocyanin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071368 | cellular response to cytokinin stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080022 | primary root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080036 | regulation of cytokinin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080113 | regulation of seed growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090506 | axillary shoot meristem initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.53; coverage=88.934; evalue=8.14e-137; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000156 | phosphorelay response regulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.53; coverage=88.934; evalue=8.14e-137; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.53; coverage=88.934; evalue=8.14e-137; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.006; coverage=65.984; evalue=1.75e-114; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G01760 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.006; coverage=65.984; evalue=1.75e-114 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G16857 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.751; coverage=67.418; evalue=9.45e-118 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G16110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.014; coverage=75.615; evalue=2.44e-123 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0224200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.53; coverage=88.934; evalue=8.77e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release |