基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

基因 ID	`LXL04_022502`
当前查询版本	OH1004
位置	Chr04:151684598-151688285 (-)
描述	Similar to RDR1: RNA-dependent RNA polymerase 1 (Arabidopsis thaliana OX%3D3702)
注释来源组装	GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_022502 · GCA_047496595.1_OSU_TarKok_2.0。

当前查询返回来自 OH1004 注释条目的 29 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID	可能功能	对应论文 / DOI
`At1g14790`	RNA依赖性直接聚合酶参与抗病毒沉默。	Analysis of the involvement of an inducible Arabidopsis RNA-dependent RNA polymerase in antiviral defense.2003 · DOI: 10.1094/mpmi.2003.16.3.206 Small RNA deep sequencing reveals role for Arabidopsis thaliana RNA-dependent RNA polymerases in viral siRNA biogenesis.2009 · DOI: 10.1371/journal.pone.0004971 RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana.2010 · DOI: 10.1073/pnas.0904086107 Arabidopsis RNA-dependent RNA polymerases and dicer-like proteins in antiviral defense and small interfering RNA biogenesis during Turnip Mosaic Virus infection.2010 · DOI: 10.1105/tpc.109.073056
`At4g11130`	RNA 依赖性直接聚合酶参与小干扰 RNA 的产生。	Genetic and functional diversification of small RNA pathways in plants.2004 · DOI: 10.1371/journal.pbio.0020104 MicroRNA-targeted and small interfering RNA-mediated mRNA degradation is regulated by argonaute, dicer, and RNA-dependent RNA polymerase in Arabidopsis.2006 · DOI: 10.1105/tpc.106.042127 An SNF2 protein associated with nuclear RNA silencing and the spread of a silencing signal between cells in Arabidopsis.2007 · DOI: 10.1105/tpc.107.051540 Nuclear gene silencing directs reception of long-distance mRNA silencing in Arabidopsis.2007 · DOI: 10.1073/pnas.0706701104 siRNA-mediated methylation of Arabidopsis telomeres.2010 · DOI: 10.1371/journal.pgen.1000986 In vitro transcription activities of Pol IV, Pol V, and RDR2 reveal coupling of Pol IV and RDR2 for dsRNA synthesis in plant RNA silencing.2012 · DOI: 10.1016/j.molcel.2012.09.027 Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2.2021 · DOI: 10.1073/pnas.2115899118
`At3g49500`	参与转录后基因沉默的 RNA 依赖性 RNA 聚合酶。	Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance.2000 · DOI: 10.1016/s0092-8674(00)80863-6 An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus.2000 · DOI: 10.1016/s0092-8674(00)80864-8 Geminivirus VIGS of endogenous genes requires SGS2/SDE1 and SGS3 and defines a new branch in the genetic pathway for silencing in plants.2004 · DOI: 10.1111/j.1365-313x.2004.02103.x SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis.2004 · DOI: 10.1101/gad.1231804 The Putative RNA-dependent RNA polymerase RDR6 acts synergistically with ASYMMETRIC LEAVES1 and 2 to repress BREVIPEDICELLUS and MicroRNA165/166 in Arabidopsis leaf development.2005 · DOI: 10.1105/tpc.105.033449 A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis.2005 · DOI: 10.1101/gad.1352605 Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis.2005 · DOI: 10.1016/j.cell.2005.11.035 DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7.2006 · DOI: 10.1016/j.cub.2006.03.035 Improperly terminated, unpolyadenylated mRNA of sense transgenes is targeted by RDR6-mediated RNA silencing in Arabidopsis.2007 · DOI: 10.1105/tpc.106.045724 Biochemical activities of Arabidopsis RNA-dependent RNA polymerase 6.2008 · DOI: 10.1074/jbc.m708983200 Small RNA deep sequencing reveals role for Arabidopsis thaliana RNA-dependent RNA polymerases in viral siRNA biogenesis.2009 · DOI: 10.1371/journal.pone.0004971 Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis.2010 · DOI: 10.1038/nsmb.1866

水稻

参考基因 ID	可能功能	对应论文 / DOI
`Os02g0736200`	可能参与RNA沉默途径，并且对小干扰RNA（siRNA）的生成是必需的。	暂无已核实直接文献
`Os04g0465700`	可能参与RNA沉默途径，并且对小干扰RNA（siRNA）的生成是必需的。	暂无已核实直接文献

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型	ID	名称	命名空间	证据	来源
GO	GO:0006952	defense response	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009615	response to virus	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009616	RNAi-mediated antiviral immune response	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009751	response to salicylic acid	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010025	wax biosynthetic process	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010267	ta-siRNA processing	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IMP:FlyBase	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010495	siRNA-mediated long-distance post-transcriptional gene silencing	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016441	post-transcriptional gene silencing	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030422	siRNA processing	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IMP:CACAO	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031047	regulatory ncRNA-mediated gene silencing	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048366	leaf development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048467	gynoecium development	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048544	recognition of pollen	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051607	defense response to virus	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0060148	positive regulation of post-transcriptional gene silencing	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0070549	siRNA-mediated gene silencing by inhibition of translation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IMP:FlyBase	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140745	siRNA transcription	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005654	nucleoplasm	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005730	nucleolus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031380	nuclear RNA-directed RNA polymerase complex	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0036464	cytoplasmic ribonucleoprotein granule	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IDA:FlyBase	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003723	RNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003727	single-stranded RNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003887	DNA-directed DNA polymerase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003968	RNA-directed RNA polymerase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071667	DNA/RNA hybrid binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G14790	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=61.096; 覆盖度=100.724; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G49500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.671; 覆盖度=104.525; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G11130	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.235; 覆盖度=101.719; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0736200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=65.612; 覆盖度=65.792; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0465700	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.982; 覆盖度=98.462; E 值=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release