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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_021966
Query referenceOH1004
LocationChr04:141566780-141567708 (+)
DescriptionSimilar to RPL23A: 60S ribosomal protein L23a (Daucus carota OX%3D4039)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021966 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g55280 Binds to a specific region on the 26S rRNA. No verified direct reference in this release
At2g39460 Binds to a specific region on the 26S rRNA. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006412translationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.961; coverage=100.0; evalue=2.04e-85; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006979response to oxidative stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=87.662; coverage=100.0; evalue=7.22e-73; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=87.662; coverage=100.0; evalue=7.22e-73; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009644response to high light intensityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.961; coverage=100.0; evalue=2.04e-85; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=87.013; coverage=100.0; evalue=9.42e-69; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=87.662; coverage=100.0; evalue=7.22e-73; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=87.013; coverage=100.0; evalue=9.42e-69; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=87.662; coverage=100.0; evalue=7.22e-73; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005840ribosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.961; coverage=100.0; evalue=2.04e-85; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=87.013; coverage=100.0; evalue=9.42e-69; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=87.013; coverage=100.0; evalue=9.42e-69; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0022625cytosolic large ribosomal subunitCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=89.61; coverage=100.0; evalue=6.34e-74; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0022626cytosolic ribosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=87.662; coverage=100.0; evalue=7.22e-73; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990904ribonucleoprotein complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.961; coverage=100.0; evalue=2.04e-85; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.961; coverage=100.0; evalue=2.04e-85; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003735structural constituent of ribosomeMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.961; coverage=100.0; evalue=2.04e-85; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019843rRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.961; coverage=100.0; evalue=2.04e-85; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G39460KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=87.013; coverage=100.0; evalue=9.42e-69UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G55280KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=87.662; coverage=100.0; evalue=7.22e-73UniProtKB/Swiss-Prot DAT 2026 current_release