基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_021955 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr04:140941729-140947192 (+) |
| 描述 | Similar to ELP1: Elongator complex protein 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_021955 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 28 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g13680 |
延伸子复合物的组分,是mcm5U(5-甲氧羰基甲基尿苷)、mcm5s2U(5-甲氧羰基甲基-2-硫代尿苷)及ncm5U(5-氨甲酰甲基尿苷)等多种tRNA修饰所必需的(基于相似性推测)。 |
The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth.2005 · DOI: 10.1073/pnas.0502600102 Mutations in ABO1/ELO2, a subunit of holo-Elongator, increase abscisic acid sensitivity and drought tolerance in Arabidopsis thaliana.2006 · DOI: 10.1128/mcb.00433-06
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002098 | tRNA wobble uridine modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.043; 覆盖度=93.808; E 值=2.43e-130; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002926 | tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006400 | tRNA modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006417 | regulation of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.043; 覆盖度=93.808; E 值=2.43e-130; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007252 | I-kappaB phosphorylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=28.56; 覆盖度=97.833; E 值=8.44e-127; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008284 | positive regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009738 | abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009787 | regulation of abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010928 | regulation of auxin mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031538 | negative regulation of anthocyanin metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035265 | organ growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048530 | fruit morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071215 | cellular response to abscisic acid stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080178 | 5-carbamoylmethyl uridine residue modification | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000024 | regulation of leaf development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.043; 覆盖度=93.808; E 值=2.43e-130; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.043; 覆盖度=93.808; E 值=2.43e-130; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033588 | elongator holoenzyme complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000049 | tRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=28.56; 覆盖度=97.833; E 值=8.44e-127; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=28.56; 覆盖度=97.833; E 值=8.44e-127; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G13680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.822; 覆盖度=102.864; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:8518 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.043; 覆盖度=93.808; E 值=2.43e-130 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:230233 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=28.638; 覆盖度=98.916; E 值=8.35e-125 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ocu:100009360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=28.386; 覆盖度=95.433; E 值=2.87e-126 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:140934 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=28.56; 覆盖度=97.833; E 值=8.44e-127 | UniProtKB/Swiss-Prot DAT 2026 current_release |