RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_021776
Query referenceOH1004
LocationChr04:136759331-136771836 (+)
DescriptionSimilar to FSD2: Superoxide dismutase [Fe] 2%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021776 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 11 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g51100 Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).
A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis.2008 · DOI: 10.1105/tpc.108.061341
At4g25100 Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os06g0115400 Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009411response to UVBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009416response to light stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=72.596; coverage=35.254; evalue=6.38e-106; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000427plastid-encoded plastid RNA polymerase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009534chloroplast thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009579thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042644chloroplast nucleoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004784superoxide dismutase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G51100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.259; coverage=44.576; evalue=4.69e-119UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGgmx:547823KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=72.646; coverage=37.797; evalue=3.38e-104UniProtKB/Swiss-Prot DAT 2026 current_release