基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_021575 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr04:132610192-132611583 (-) |
| 描述 | Similar to DOF4.6: Dof zinc finger protein DOF4.6 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_021575 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g24060 |
能特异性结合5'-AA[AG]G-3'共识核心序列的转录因子。 | 暂无已核实直接文献 |
At3g61850 |
特异性参与种子萌发母本调控的转录因子。 | 暂无已核实直接文献 |
At5g60200 |
转录因子,能够特异性结合5'-AA[AG]G-3'共识核心序列(通过相似性推测)。 | |
At3g55370 |
与 5'-AA[AG]G-3' 共有核心序列特异性结合的转录因子。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0567800 |
可能在发育中的种子中转录激活种子储存蛋白基因的转录因子。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.714; 覆盖度=120.132; E 值=4.99e-44; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.714; 覆盖度=120.132; E 值=4.99e-44; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009639 | response to red or far red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.948; 覆盖度=95.38; E 值=4.07e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=77.612; 覆盖度=22.112; E 值=1.27e-30; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.948; 覆盖度=95.38; E 值=4.07e-40; UniProt GO evidence=IMP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=65.476; 覆盖度=27.723; E 值=1.96e-32; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.948; 覆盖度=95.38; E 值=4.07e-40; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=77.612; 覆盖度=22.112; E 值=1.27e-30; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=65.476; 覆盖度=27.723; E 值=1.96e-32; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090057 | root radial pattern formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=65.476; 覆盖度=27.723; E 值=1.96e-32; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.714; 覆盖度=120.132; E 值=4.99e-44; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.948; 覆盖度=95.38; E 值=4.07e-40; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.714; 覆盖度=120.132; E 值=4.99e-44; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.948; 覆盖度=95.38; E 值=4.07e-40; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.714; 覆盖度=120.132; E 值=4.99e-44; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.714; 覆盖度=120.132; E 值=4.99e-44; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G55370 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=77.612; 覆盖度=22.112; E 值=1.27e-30 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.948; 覆盖度=95.38; E 值=4.07e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G24060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=35.714; 覆盖度=120.132; E 值=4.99e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G60200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=65.476; 覆盖度=27.723; E 值=1.96e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0567800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=35.608; 覆盖度=111.221; E 值=3.54e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release |