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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_020980
Query referenceOH1004
LocationChr04:117164622-117171874 (-)
DescriptionSimilar to ALA3: Phospholipid-transporting ATPase 3 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_020980 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 35 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g59820 Involved in transport of phospholipids.
The Arabidopsis P4-ATPase ALA3 localizes to the golgi and requires a beta-subunit to function in lipid translocation and secretory vesicle formation.2008 · DOI: 10.1105/tpc.107.054767
IRREGULAR TRICHOME BRANCH 2 (ITB2) encodes a putative aminophospholipid translocase that regulates trichome branch elongation in Arabidopsis.2009 · DOI: 10.1111/j.1365-313x.2009.03954.x
Intracellular targeting signals and lipid specificity determinants of the ALA/ALIS P4-ATPase complex reside in the catalytic ALA alpha-subunit.2010 · DOI: 10.1091/mbc.e09-08-0656
Loss of the Arabidopsis thaliana P₄-ATPase ALA3 reduces adaptability to temperature stresses and impairs vegetative, pollen, and ovule development.2013 · DOI: 10.1371/journal.pone.0062577
An Arabidopsis Lipid Flippase Is Required for Timely Recruitment of Defenses to the Host-Pathogen Interface at the Plant Cell Surface.2017 · DOI: 10.1016/j.molp.2017.04.003
At1g68710 Involved in transport of phospholipids. No verified direct reference in this release
At3g25610 Involved in transport of phospholipids. No verified direct reference in this release
At1g13210 Involved in transport of phospholipids. No verified direct reference in this release
At3g27870 Involved in transport of phospholipids. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0002237response to molecule of bacterial originBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0002238response to molecule of fungal originBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006893Golgi to plasma membrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008104intracellular protein localizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009860pollen tube growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010183pollen tube guidanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015031protein transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016192vesicle-mediated transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042742defense response to bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045332phospholipid translocationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048194Golgi vesicle buddingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048364root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048367shoot system developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901703protein localization involved in auxin polar transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000139Golgi membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.714; coverage=92.371; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005789endoplasmic reticulum membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031982vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0055037recycling endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090404pollen tube tipCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000287magnesium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015247aminophospholipid flippase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090554phosphatidylcholine floppase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.479; coverage=93.191; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140326ATPase-coupled intramembrane lipid transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140327flippase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.085; coverage=92.207; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140333glycerophospholipid flippase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.479; coverage=93.191; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G13210KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.262; coverage=93.273; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G59820KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.658; coverage=97.785; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G68710KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.714; coverage=92.371; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G25610KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.479; coverage=93.191; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G27870KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.085; coverage=92.207; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release