Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_018093 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:6556003-6558840 (-) |
| Description | Similar to At1g16060: AP2-like ethylene-responsive transcription factor At1g16060 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018093 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 32 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g16060 |
Probably acts as a transcriptional activator. | No verified direct reference in this release |
At3g54320 |
May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). |
Contrapuntal networks of gene expression during Arabidopsis seed filling.2002 · DOI: 10.1105/tpc.000877 WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis.2004 · DOI: 10.1111/j.1365-313x.2004.02235.x ACTIVATOR of Spomin::LUC1/WRINKLED1 of Arabidopsis thaliana transactivates sugar-inducible promoters.2005 · DOI: 10.1093/pcp/pci072
|
At5g57390 |
Probably acts as a transcriptional activator. | |
At1g79700 |
Probably acts as a transcriptional activator. | No verified direct reference in this release |
At1g72570 |
Probably acts as a transcriptional activator. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006109 | regulation of carbohydrate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006110 | regulation of glycolytic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006629 | lipid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008610 | lipid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009744 | response to sucrose | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009873 | ethylene-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010187 | negative regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010311 | lateral root formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019432 | triglyceride biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040008 | regulation of growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040019 | positive regulation of embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045723 | positive regulation of fatty acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060771 | phyllotactic patterning | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060772 | leaf phyllotactic patterning | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901959 | positive regulation of cutin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904278 | positive regulation of wax biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.205; coverage=93.521; evalue=7.16e-84; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905392 | plant organ morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83; UniProt GO evidence=IMP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.205; coverage=93.521; evalue=7.16e-84; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019900 | kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.205; coverage=93.521; evalue=7.16e-84; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G16060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.49; coverage=94.93; evalue=1.09e-100 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G72570 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=61.111; coverage=55.775; evalue=7.2e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G79700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.205; coverage=93.521; evalue=7.16e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G54320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=74.242; coverage=55.775; evalue=8.35e-91 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G57390 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.556; coverage=63.38; evalue=5.61e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release |