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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_018086
Query referenceOH1004
LocationChr04:6405549-6406871 (-)
DescriptionSimilar to GAE1: UDP-glucuronate 4-epimerase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018086 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g30440 UDP-D-glucuronate 4-epimerase involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components.
The biosynthesis of D-Galacturonate in plants. functional cloning and characterization of a membrane-anchored UDP-D-Glucuronate 4-epimerase from Arabidopsis.2004 · DOI: 10.1104/pp.104.043745
At1g02000 Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components. No verified direct reference in this release
At2g45310 Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components. No verified direct reference in this release
At4g00110 Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components. No verified direct reference in this release
At3g23820 Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components.
Identification and characterization of a UDP-D-glucuronate 4-epimerase in Arabidopsis.2004 · DOI: 10.1016/j.febslet.2004.06.005

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0033481galacturonate biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050829defense response to Gram-negative bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071456cellular response to hypoxiaBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=HEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000138Golgi trans cisternaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005802trans-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.517; coverage=97.955; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032580Golgi cisterna membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016854racemase and epimerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.206; coverage=98.409; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050378UDP-glucuronate 4-epimerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G02000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.206; coverage=98.409; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G45310KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.287; coverage=99.773; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G23820KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=71.751; coverage=80.455; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G00110KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.517; coverage=97.955; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G30440KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.802; coverage=98.636; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release