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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_017686
Query referenceOH1004
LocationChr03:157124242-157127360 (+)
DescriptionSimilar to MBD4L: Methyl-CpG-binding domain protein 4-like protein (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_017686 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 21 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g07930 Monofunctional DNA glycosylase targeting U:G and T:G mispairs.
Molecular characterization of a putative plant homolog of MBD4 DNA glycosylase.2013 · DOI: 10.1016/j.dnarep.2013.08.002
Expression and function of AtMBD4L, the single gene encoding the nuclear DNA glycosylase MBD4L in Arabidopsis.2015 · DOI: 10.1016/j.plantsci.2015.03.011

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006281DNA repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006284base-excision repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006974DNA damage responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006979response to oxidative stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007095mitotic G2 DNA damage checkpoint signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009314response to radiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009408response to heatBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032355response to estradiolBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.845; coverage=19.586; evalue=7.23e-31; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034605cellular response to heatBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045008depyrimidinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.845; coverage=19.586; evalue=7.23e-31; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016607nuclear speckCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003696satellite DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.845; coverage=19.586; evalue=7.23e-31; UniProt GO evidence=TAS:ProtIncUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004520DNA endonuclease activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.845; coverage=19.586; evalue=7.23e-31; UniProt GO evidence=TAS:ProtIncUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008263pyrimidine-specific mismatch base pair DNA N-glycosylase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31; UniProt GO evidence=ISO:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019104DNA N-glycosylase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G07930KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.974; coverage=26.897; evalue=1.62e-69UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:8930KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=40.845; coverage=19.586; evalue=7.23e-31UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:17193KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=40.845; coverage=19.586; evalue=7.05e-31UniProtKB/Swiss-Prot DAT 2026 current_release